MWF_Schedule

Week
Topic
Tutorials etc
1
Aug 25,27,29
(HW0 )(Due Now) ; Internet Searching and Search Engines
Downloading compressed files
Windows GUI vrs Command line processing (DOS & UNIX)
( HW1 ):Due Sept 3 )
2
Sept 3,5
3
 Sept 8,10,12
Start Python GUI
( HW3: Due Sept 12  ): Do exercises 2.3 and 2.4
Class Lecture on scripting in Python ( no ppt)
(HW4:Due Sept 15) :  functions1 
(HW5:Due Sept 17 ) functions2
Download ThinkPython by  DowneyDownload Anaconda version of python More formulas

 Sept 15, 17 ,19
mon:Exam Review & more functions 

   Wed:Exam I (Sept 17) 
Fri: Skip Chap 4
PythonConditionsCh5NEW
Download Python Libs
5
Sept 22,24,26
PythonIterationCh7
Homework 6 (due Sept 26)
 PythonStringsCh8 

Movies:  Programming Importance 
Grace Hopper :  Letterman  (  history  )
(  Women in Computing  )

IPython byBrian Granger

6
 Sept 29, Oct 1,3  

 PythonStringsCh8
Homework 7 (Due Wed Oct 10)
 NCBIDenisovan’s
7 Oct6,8,10
Excel Graphing/Python Graphing
ExcelHomework8
(  Due: Oct 13 Graphing Python Data  )
 Fun with Functions in Excel 
  Fun with Functions 2 Excel 
8  Oct 13,15,17
 PythonListsCh10
PythonMatplotlibCh10_6 (eegdata)
  Homework 9 (list practice)
List_Tutorial
pyplot_Tutorial
9  Oct 20,22,24
 Download paint.net on your home machine. 
Paint.net tutorial
 Image file formats,
File formats,
Animated Gifs and layers in Paint.net
Homework10: Image Modification (due wed)

 

  Inkscape is vector graphics
Paint.netis raster graphics Image format  tutorial 
10  Oct 27,29,31  Image Processing in PythonVector Graphics  Batch Image ProcessingBioPythonBook(pdf)
11  Nov 3,5,7 Exam Wednesday (exam review)
12
 Nov 10,12,14  BioPython (web page)BioPython Cookbook(html) Biopython Seq and SeqRecordBioPython Homework11PythonDictionaryCh11
NCBI Mycoplasma Genitalium See JN181159.1
13
 Nov 17,19,21  Systems Biology NetLogo Home Site  Papers using NetLogo,Santa Fe InstituteAgent Based ModelingSoftware
14
Nov 24,Thanksgiving NetLogo Homework 12
15  Dec 1,3,5  Bibliography Software(EndNote, Word)
16
COMPREHENSIVE FINAL
Wed Dec 10th @ 10:30 – 12:30

Comments are closed.